148 lines
4.7 KiB
R
148 lines
4.7 KiB
R
#' Approximates Kronecker Product decomposition.
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#'
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#' Approximates the matrices `A` and `B` such that
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#' C = A %x% B
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#' with `%x%` the kronecker product of the matrixes `A` and `B`
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#' of dimensions `dimA` and `dimB` respectively.
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#'
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#' @param C desired kronecker product result.
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#' @param dimA length 2 vector of dimensions of \code{A}.
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#' @param dimB length 2 vector of dimensions of \code{B}.
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#'
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#' @return list with attributes `A` and `B`.
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#'
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#' @examples
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#' A <- matrix(seq(14), 7, 2)
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#' B <- matrix(c(1, 0), 3, 4)
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#' C <- kronecker(A, B) # the same as 'C <- A %x% B'
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#' approx.kronecker(C, dim(A), dim(B))
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#'
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#' @seealso C.F. Van Loan / Journal of Computational and Applied Mathematics
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#' 123 (2000) 85-100 (pp. 93-95)
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#'
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#' @export
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approx.kronecker <- function(C, dimA, dimB = dim(C) / dimA) {
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dim(C) <- c(dimB[1L], dimA[1L], dimB[2L], dimA[2L])
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R <- aperm(C, c(2L, 4L, 1L, 3L))
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dim(R) <- c(prod(dimA), prod(dimB))
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if (requireNamespace("RSpectra", quietly = TRUE)) {
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svdR <- RSpectra::svds(R, 1L)
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} else {
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svdR <- svd(R, 1L, 1L)
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}
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list(
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A = array(sqrt(svdR$d[1]) * svdR$u, dimA),
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B = array(sqrt(svdR$d[1]) * svdR$v, dimB)
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)
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}
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#' Kronecker Product Decomposition.
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#'
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#' Computes the components summation components `A_i`, `B_i` of a sum of
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#' Kronecker products
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#' C = sum_i A_i %x% B_i
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#' with the minimal estimated number of summands.
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#'
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#' @param C desired kronecker product result.
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#' @param dimA length 2 vector of dimensions of \code{A}.
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#' @param dimB length 2 vector of dimensions of \code{B}.
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#' @param tol tolerance of singular values of \code{C} to determin the number of
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#' needed summands.
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#'
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#' @return list of lenghth with estimated number of summation components, each
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#' entry consists of a list with named entries \code{"A"} and \code{"B"} of
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#' dimensions \code{dimA} and \code{dimB}.
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#'
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#' @examples
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#' As <- replicate(3, matrix(rnorm(2 * 7), 2), simplify = FALSE)
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#' Bs <- replicate(3, matrix(rnorm(5 * 3), 5), simplify = FALSE)
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#' C <- Reduce(`+`, Map(kronecker, As, Bs))
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#'
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#' decomposition <- decompose.kronecker(C, c(2, 7))
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#'
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#' reconstruction <- Reduce(`+`, Map(function(summand) {
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#' kronecker(summand[[1]], summand[[2]])
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#' }, decomposition), array(0, dim(C)))
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#'
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#' stopifnot(all.equal(C, reconstruction))
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#'
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#' @export
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decompose.kronecker <- function(C, dimA, dimB = dim(C) / dimA, tol = 1e-7) {
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# convert the equivalent outer product
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dim(C) <- c(dimB[1L], dimA[1L], dimB[2L], dimA[2L])
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C <- aperm(C, c(2L, 4L, 1L, 3L), resize = FALSE)
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dim(C) <- c(prod(dimA), prod(dimB))
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# Singular Valued Decomposition
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svdC <- La.svd(C)
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# Sum of Kronecker Components
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lapply(seq_len(sum(svdC$d > tol)), function(i) list(
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A = matrix(svdC$d[i] * svdC$u[, i], dimA),
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B = matrix(svdC$vt[i, ], dimB)
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))
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}
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### Given that C is a Kronecker product this is a fast method but a bit
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### unreliable in full generality.
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# decompose.kronecker <- function(C, dimA, dimB = dim(C) / dimA) {
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# dim(C) <- c(dimB[1L], dimA[1L], dimB[2L], dimA[2L])
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# R <- aperm(C, c(2L, 4L, 1L, 3L))
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# dim(R) <- c(prod(dimA), prod(dimB))
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# max.index <- which.max(abs(R))
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# row.index <- ((max.index - 1L) %% nrow(R)) + 1L
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# col.index <- ((max.index - 1L) %/% nrow(R)) + 1L
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# max.elem <- if (abs(R[max.index]) > .Machine$double.eps) R[max.index] else 1
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# list(
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# A = array(R[, col.index], dimA),
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# B = array(R[row.index, ] / max.elem, dimB)
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# )
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# }
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# kron <- function(A, B) {
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# perm <- as.vector(t(matrix(seq_len(2 * length(dim(A))), ncol = 2)[, 2:1]))
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# K <- aperm(outer(A, B), perm)
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# dim(K) <- dim(A) * dim(B)
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# K
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# }
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# kronperm <- function(A) {
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# # force A to have even number of dimensions
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# dim(A) <- c(dim(A), rep(1L, length(dim(A)) %% 2L))
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# # compute axis permutation
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# perm <- as.vector(t(matrix(seq_along(dim(A)), ncol = 2)[, 2:1]))
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# # permute elements of A
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# K <- aperm(A, perm, resize = FALSE)
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# # collapse/set dimensions
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# dim(K) <- head(dim(A), length(dim(A)) / 2) * tail(dim(A), length(dim(A)) / 2)
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# K
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# }
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# p <- c(2, 3, 5)
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# q <- c(3, 4, 7)
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# A <- array(rnorm(prod(p)), p)
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# B <- array(rnorm(prod(q)), q)
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# all.equal(kronperm(outer(A, B)), kronecker(A, B))
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# all.equal(kron(A, B), kronecker(A, B))
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# dA <- c(2, 3, 5)
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# dB <- c(3, 4, 7)
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# A <- array(rnorm(prod(dA)), dA)
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# B <- array(rnorm(prod(dB)), dB)
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# X <- outer(A, B)
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# r <- length(dim(X)) / 2
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# I <- t(do.call(expand.grid, Map(seq_len, head(dim(X), r) * tail(dim(X), r))))
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# K <- apply(rbind(
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# (I - 1) %/% tail(dim(X), r) + 1,
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# (I - 1) %% tail(dim(X), r) + 1
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# ), 2, function(i) X[sum(c(1, cumprod(head(dim(X), -1))) * (i - 1)) + 1])
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# dim(K) <- head(dim(X), r) * tail(dim(X), r)
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# all.equal(kronecker(A, B), K)
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