daniel
2dfdc7083b
add: extended interface of num.deriv and matrixImage, add: "tests", add: moved make.gmlm.family into seperate file
51 lines
1.7 KiB
R
51 lines
1.7 KiB
R
# F(X) = log(det(X)) if det(X) > 0
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# dF(X) = tr(X^-1 dX)
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# DF(X) = vec((X^-1)')'
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test_that("Matrix Calculus 1", {
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# test data
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X <- tcrossprod(diag(5) + matrix(runif(5^2, -.1, .1), 5))
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num.grad <- num.deriv(function(X) log(det(X)), X)
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ana.grad <- c(solve(X))
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expect_equal(num.grad, ana.grad)
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})
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# F(mu) = <X - mu, (X - mu) x_{k in [r]} Delta_K^-1> for Delta_k = Delta_k'
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# DF(mu) = -2 vec((X - mu) x_{k in [r]} Delta_K^-1)'
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test_that("Matrix Calculus 2", {
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p <- c(2, 3, 5)
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X <- array(rnorm(prod(p)), dim = p)
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mu <- array(rnorm(prod(p)), dim = p)
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Deltas <- Map(function(pj) tcrossprod(diag(pj) + runif(pj^2, -0.1, 0.1)), p)
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ana.grad <- -2 * c(mlm(X - mu, Map(solve, Deltas)))
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num.grad <- num.deriv(function(mu) sum((X - mu) * mlm(X - mu, Map(solve, Deltas))), mu)
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expect_equal(num.grad, ana.grad)
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})
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# F(Delta_j) = <X - mu, (X - mu) x_{k in [r]} Delta_K^-1> for Delta_k = Delta_k'
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# DF(Delta_j) = -((X - mu) x_{k in [r]} Delta_K^-1)_(j) (X - mu)_(j)' Delta_j^-1
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test_that("Matrix Calculus 3", {
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# config
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p <- c(2, 3, 5)
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# generate test data
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X <- array(rnorm(prod(p)), dim = p)
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mu <- array(rnorm(prod(p)), dim = p)
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Deltas <- Map(function(pj) tcrossprod(diag(pj) + runif(pj^2, -0.1, 0.1)), p)
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# check analytic to numeric derivatives
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for (j in seq_along(Deltas)) {
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num.grad <- matrix(num.deriv(function(Delta_j) {
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Deltas[[j]] <- Delta_j
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sum((X - mu) * mlm(X - mu, Map(solve, Deltas)))
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}, Deltas[[j]]), p[j])
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ana.grad <- -mcrossprod(mlm(X - mu, Map(solve, Deltas)), X - mu, j) %*% solve(Deltas[[j]])
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expect_equal(num.grad, ana.grad)
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}
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})
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